From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools

Robyn J. Wright; Andrè M. Comeau; Morgan G.I. Langille

doi:10.1099/mgen.0.000949

From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools

Robyn J. Wright, Andrè M. Comeau, Morgan G.I. Langille

科研成果: 期刊稿件 › 文章 › 同行评审

源语言	英语
文章编号	000949
期刊	Microbial genomics
卷	9
期	3
DOI	https://doi.org/10.1099/mgen.0.000949
出版状态	已出版 - 2023

!!!ASJC Scopus Subject Areas

遗传学
分子生物学
流行病学
微生物学

访问文件

10.1099/mgen.0.000949

其它文件与链接

Reports from Dalhousie University Add New Data to Research in Information Technology (From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools)
André M., C.
3/20/23
1 项目媒体报道
新闻 / 媒体: !!!Research

引用此

Wright, R. J., Comeau, A. M., & Langille, M. G. I. (2023). From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools. Microbial genomics, 9(3), 文章 000949. https://doi.org/10.1099/mgen.0.000949

@article{2316a25af5e047279406b5a7f299920f,

title = "From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools",

keywords = "metagenome bioinformatic methodology, metagenome taxonomic classification, microbiome, microbiome database, taxonomic classifiers, tool performance",

author = "Wright, {Robyn J.} and Comeau, {Andr{\`e} M.} and Langille, {Morgan G.I.}",

note = "Publisher Copyright: {\textcopyright} 2023 The Authors.",

year = "2023",

doi = "10.1099/mgen.0.000949",

language = "English",

volume = "9",

journal = "Microbial genomics",

issn = "2057-5858",

publisher = "Microbiology Society",

number = "3",

}

TY - JOUR

T1 - From defaults to databases

T2 - parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools

AU - Wright, Robyn J.

AU - Comeau, Andrè M.

AU - Langille, Morgan G.I.

PY - 2023

Y1 - 2023

KW - metagenome bioinformatic methodology

KW - metagenome taxonomic classification

KW - microbiome

KW - microbiome database

KW - taxonomic classifiers

KW - tool performance

UR - http://www.scopus.com/inward/record.url?scp=85149739057&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85149739057&partnerID=8YFLogxK

U2 - 10.1099/mgen.0.000949

DO - 10.1099/mgen.0.000949

M3 - Article

C2 - 36867161

AN - SCOPUS:85149739057

SN - 2057-5858

VL - 9

JO - Microbial genomics

JF - Microbial genomics

IS - 3

M1 - 000949

ER -

From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools

!!!ASJC Scopus Subject Areas

访问文件

其它文件与链接

指纹

新闻 / 媒体

Reports from Dalhousie University Add New Data to Research in Information Technology (From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools)

引用此