Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution

Le Bao, Hong Gu, Katherine A. Dunn, Joseph P. Bielawski

Research output: Contribution to journalArticlepeer-review

14 Citations (Scopus)
Original languageEnglish
Pages (from-to)1995-2007
Number of pages13
JournalMolecular Biology and Evolution
Volume25
Issue number9
DOIs
Publication statusPublished - Sept 2008

ASJC Scopus Subject Areas

  • Genetics
  • Ecology, Evolution, Behavior and Systematics
  • Molecular Biology

Keywords

  • Bayes error rate
  • Codon model
  • Likelihood-based clustering
  • Nonsynonymous/synonymous rate ratio
  • Positive Darwinian selection

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