Improved inference of site-specific positive selection under a generalized parametric codon model when there are multinucleotide mutations and multiple nonsynonymous rates

Katherine A. Dunn, Toby Kenney, Hong Gu, Joseph P. Bielawski

Research output: Contribution to journalArticlepeer-review

8 Citations (Scopus)
Original languageEnglish
Article number22
JournalBMC Evolutionary Biology
Volume19
Issue number1
DOIs
Publication statusPublished - Jan 14 2019

ASJC Scopus Subject Areas

  • Ecology, Evolution, Behavior and Systematics

Keywords

  • Codon frequencies
  • Codon model
  • False positives
  • G-series models
  • Likelihood ratio test
  • M-series models
  • Model misspecification
  • Multiple nonsynonymous rates
  • Multiple nucleotide mutations
  • Positive selection
  • Protein evolution

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